SLURM Submit script example
This script example has been generated using the Job Script Generator.
conda_example.slm
#!/bin/bash #SBATCH -J conda_example #SBATCH -e conda_example.err #SBATCH -o conda_example.out #SBATCH -p std #SBATCH --nodes=1 #SBATCH --ntasks=1 #SBATCH --mem=2000MB module load apps/conda/3 INPUT_DIR=${SLURM_SUBMIT_DIR} OUTPUT_DIR=${SLURM_SUBMIT_DIR} cd $SCRATCH cp -r $INPUT_DIR/* $SCRATCH conda activate base python example.py cp ./* $OUTPUT_DIR
Sbatch options:
- -J: Specify a name for the job allocation. The default is the name of the batch script.
- -e: Specify a name for the error output file.
- -o: Specify a name for the output file.
- -p: Specify the name of the partition (queue) where the job will be submitted. The default is std.
- --nodes: Number of nodes requested for allocation.
- --ntasks: Number of processes requested for allocation.
- --mem, --mem-per-cpu: Memory allocated per node/core respectively. If it is not specified SLURM associates:
- 3998MB per requested core in std and gpu nodes.
- 24180MB per requested core in mem nodes.