|
#!/bin/bash #SBATCH -J R_example #SBATCH -e R_example.err #SBATCH -o R_example.out #SBATCH -p std #SBATCH -n 1 #SBATCH -t 0-02:00 module load apps/R/3.5.0 ## # Modify the input and output files! INPUT_FILE=R_example.R OUTPUT_FILE=R_example.out ## # You don't need to modify nothing more cp -r ${SLURM_SUBMIT_DIR}/${INPUT_FILE} ${SCRATCH} cd ${SCRATCH} srun Rscript ${INPUT_FILE} > ${OUTPUT_FILE} cp ./${OUTPUT_FILE} ${SLURM_SUBMIT_DIR} |
The options shown in the example are detailed below. For more information and a more comprehensive list of available options, see the sbatch command page.
-n: Number of tasks.